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B. Sc. Biochemistry & Molecular Biology
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Compare two classifiers based on their performances.
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BIOC 4010
]
Explain what a Python script does using a combination of read, write and file operations.
[
BIOC 4010
]
Explain what is a Hamiltonian/Eulerian path and what it means to the genome assembly problem.
[
BIOC 4010
]
Explain what is an algorithm.
[
BIOC 4010
]
Explain why structural alignment is the “ground truth” for a sequence alignment.
[
BIOC 4010
]
Explain why the quality of a simulation is more dependent on the speed of a calculation rather than its accuracy.
[
BIOC 4010
]
Relate the concept of accuracy with this of specificity, sensitivity and F-score.
[
BIOC 4010
]
Contrast the challenge of finding exons versus finding ORFs.
[
BIOC 4010
]
Explain the Greedy method of genome assembly and its limitations.
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BIOC 4010
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Explain where the OLC/Eulerian_path algorithm may fail to give the correct genomic sequence.
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BIOC 4010
]
Explain why ab initio protein folding, or the prediction of tertiary structure from a sequence, is considered one of the most challenging problems in computational biology.
[
BIOC 4010
]
Explain the problems related to the parametrization of Force Fields.
[
BIOC 4010
]
Distinguish Force Field and statistical mechanics energies.
[
BIOC 4010
]
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